Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | VAPA_RS10925 | Not Available | Positive | 2356402 - 2357019 | 22845.3 |
| efflux rnd transporter periplasmic adaptor subunit | VAPA_RS10930 | Not Available | Positive | 2357104 - 2358219 | 38626.9 |
| efflux rnd transporter permease subunit | VAPA_RS10935 | Not Available | Positive | 2358216 - 2361293 | 111063.0 |
| oxidoreductase | VAPA_RS10940 | Not Available | Positive | 2361333 - 2362145 | 28897.9 |
| lysr family transcriptional regulator | VAPA_RS10945 | Not Available | Positive | 2362184 - 2363152 | 35320.9 |
| hypothetical protein | VAPA_RS35535 | Not Available | Negative | 2363149 - 2363361 | 7372.7 |
| arac family transcriptional regulator | VAPA_RS10950 | Not Available | Negative | 2363794 - 2364696 | 33933.8 |
| yybh family protein | VAPA_RS10955 | Not Available | Positive | 2364825 - 2365265 | 16574.6 |
| sigma-54 interaction domain-containing protein | VAPA_RS10960 | Not Available | Positive | 2365400 - 2367043 | 60520.6 |
| mbl fold metallo-hydrolase | VAPA_RS10965 | Not Available | Negative | 2367091 - 2367981 | 32255.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
