Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phne/ptxc family abc transporter permease | VAPA_RS10880 | Not Available | Positive | 2345683 - 2346519 | 29969.6 |
| phosphonate abc transporter, permease protein phne | VAPA_RS10885 | Not Available | Positive | 2346530 - 2347366 | 29727.1 |
| arac family transcriptional regulator | VAPA_RS10890 | Not Available | Positive | 2347599 - 2348618 | 37760.1 |
| nitroreductase | VAPA_RS10895 | Not Available | Positive | 2348850 - 2349590 | 27646.2 |
| amp-binding protein | VAPA_RS10900 | Not Available | Positive | 2349587 - 2351239 | 59156.2 |
| maoc family dehydratase | VAPA_RS10905 | Not Available | Positive | 2351232 - 2351675 | 15588.6 |
| crp/fnr family transcriptional regulator | VAPA_RS10910 | Not Available | Positive | 2352114 - 2352794 | 25813.3 |
| hypothetical protein | VAPA_RS35135 | Not Available | Positive | 2352956 - 2353132 | 6009.49 |
| tannase/feruloyl esterase family alpha/beta hydrolase | VAPA_RS10915 | Not Available | Positive | 2353260 - 2354582 | 45768.8 |
| efflux transporter outer membrane subunit | VAPA_RS10920 | Not Available | Negative | 2354832 - 2356295 | 50660.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
