Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyacid dehydrogenase | VAPA_RS10830 | Not Available | Positive | 2335679 - 2336599 | 32968.6 |
| l-idonate 5-dehydrogenase | VAPA_RS10835 | Not Available | Positive | 2336618 - 2337691 | 37820.1 |
| laci family dna-binding transcriptional regulator | VAPA_RS10840 | Not Available | Negative | 2337698 - 2338708 | 36265.5 |
| acetoacetate decarboxylase family protein | VAPA_RS10845 | Not Available | Positive | 2338941 - 2339720 | 27801.3 |
| helix-turn-helix transcriptional regulator | VAPA_RS10850 | Not Available | Positive | 2339749 - 2340561 | 29526.5 |
| selenophosphate synthetase senc | VAPA_RS10855 | Not Available | Negative | 2340620 - 2341693 | 36838.6 |
| selenoneine biosynthesis selenosugar synthase senb | VAPA_RS10860 | Not Available | Negative | 2341690 - 2342682 | 35378.5 |
| selenoneine synthase sena | VAPA_RS10865 | Not Available | Positive | 2342670 - 2343926 | 46327.2 |
| putative selenate abc transporter substrate-binding protein | VAPA_RS10870 | Not Available | Positive | 2343979 - 2344836 | 30918.0 |
| phosphonate abc transporter atp-binding protein | VAPA_RS10875 | Not Available | Positive | 2344862 - 2345680 | 29037.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
