Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | VAPA_RS10780 | Not Available | Negative | 2327544 - 2328686 | 41220.6 |
| tautomerase family protein | VAPA_RS10785 | Not Available | Negative | 2328692 - 2329096 | 14371.8 |
| laci family dna-binding transcriptional regulator | VAPA_RS10790 | Not Available | Negative | 2329112 - 2330122 | 35807.1 |
| dihydrodipicolinate synthase family protein | VAPA_RS10795 | Not Available | Positive | 2330300 - 2331256 | 32866.3 |
| dihydrodipicolinate synthase family protein | VAPA_RS10800 | Not Available | Positive | 2331269 - 2332162 | 32144.1 |
| amino acid abc transporter atp-binding protein | VAPA_RS10805 | Not Available | Positive | 2332172 - 2332954 | 29481.8 |
| duf3830 family protein | VAPA_RS10810 | Not Available | Positive | 2332986 - 2333396 | 14898.0 |
| antibiotic biosynthesis monooxygenase | VAPA_RS10815 | Not Available | Negative | 2333426 - 2333764 | 13017.5 |
| nad(p)-dependent oxidoreductase | VAPA_RS10820 | Not Available | Negative | 2333799 - 2334698 | 30607.9 |
| sdr family oxidoreductase | VAPA_RS10825 | Not Available | Negative | 2334702 - 2335463 | 26348.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
