Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxaloacetate decarboxylase | VAPA_RS10730 | Not Available | Positive | 2312565 - 2313425 | 30888.1 |
| alpha/beta fold hydrolase | VAPA_RS10735 | Not Available | Negative | 2313447 - 2314454 | 35483.9 |
| marr family winged helix-turn-helix transcriptional regulator | VAPA_RS10740 | Not Available | Negative | 2314568 - 2315044 | 17559.6 |
| beta strand repeat-containing protein | VAPA_RS10745 | Not Available | Negative | 2315202 - 2320241 | 169450.0 |
| hypothetical protein | VAPA_RS10750 | Not Available | Negative | 2320584 - 2322311 | 62064.0 |
| yran family protein | VAPA_RS10755 | Not Available | Negative | 2322360 - 2323789 | 50247.5 |
| amino acid abc transporter permease | VAPA_RS10760 | Not Available | Negative | 2323841 - 2324521 | 24615.7 |
| abc transporter substrate-binding protein | VAPA_RS10765 | Not Available | Negative | 2324546 - 2325382 | 30145.5 |
| maoc family dehydratase | VAPA_RS10770 | Not Available | Negative | 2325450 - 2325932 | 17345.5 |
| acyl coa:acetate/3-ketoacid coa transferase | VAPA_RS10775 | Not Available | Negative | 2325929 - 2327530 | 57630.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
