Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | VAPA_RS10680 | Not Available | Negative | 2293644 - 2294423 | 28215.0 |
| duf5801 repeats-in-toxin domain-containing protein | VAPA_RS35410 | Not Available | Positive | 2295020 - 2300635 | 189323.0 |
| type i secretion system permease/atpase | VAPA_RS10690 | Not Available | Positive | 2300716 - 2302509 | 63750.2 |
| type i secretion system permease/atpase | VAPA_RS10695 | Not Available | Positive | 2302506 - 2304233 | 61641.1 |
| hlyd family type i secretion periplasmic adaptor subunit | VAPA_RS10700 | Not Available | Positive | 2304279 - 2305652 | 50281.2 |
| tolc family outer membrane protein | VAPA_RS10705 | Not Available | Positive | 2305656 - 2306990 | 49498.6 |
| lrp/asnc family transcriptional regulator | VAPA_RS10710 | Not Available | Negative | 2307039 - 2307533 | 18915.0 |
| biosynthetic-type acetolactate synthase large subunit | VAPA_RS10715 | Not Available | Positive | 2307599 - 2309389 | 63670.1 |
| propionate catabolism operon regulatory protein prpr | VAPA_RS10720 | Not Available | Negative | 2309408 - 2311378 | 70256.9 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS10725 | Not Available | Positive | 2311603 - 2312556 | 33016.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
