Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pa4780 family rio1-like protein kinase | VAPA_RS10630 | Not Available | Negative | 2282950 - 2283801 | 31767.1 |
| gnat family n-acetyltransferase | VAPA_RS10635 | Not Available | Negative | 2283798 - 2284892 | 41025.8 |
| hypothetical protein | VAPA_RS10640 | Not Available | Positive | 2285379 - 2285765 | 12436.4 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS10645 | Not Available | Positive | 2285879 - 2286850 | 33859.0 |
| acyclic terpene utilization atua family protein | VAPA_RS10650 | Not Available | Positive | 2286937 - 2288331 | 48531.3 |
| hypothetical protein | VAPA_RS10655 | Not Available | Positive | 2288328 - 2288696 | 13552.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS10660 | Not Available | Positive | 2288752 - 2289723 | 33988.9 |
| alpha/beta hydrolase domain-containing protein | VAPA_RS10665 | Not Available | Positive | 2289786 - 2291876 | 73434.9 |
| nad(p)h-dependent oxidoreductase | VAPA_RS10670 | Not Available | Negative | 2291873 - 2292652 | 28852.3 |
| lysr family transcriptional regulator | VAPA_RS10675 | Not Available | Positive | 2292742 - 2293635 | 32752.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
