Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caib/baif coa transferase family protein | VAPA_RS10580 | Not Available | Positive | 2273585 - 2274766 | 41983.0 |
| hpch/hpai aldolase/citrate lyase family protein | VAPA_RS10585 | Not Available | Positive | 2274763 - 2275647 | 30588.7 |
| tripartite tricarboxylate transporter substrate binding protein bugd | VAPA_RS10590 | Not Available | Positive | 2275644 - 2276648 | 35654.6 |
| toxin-antitoxin system ywqk family antitoxin | VAPA_RS10595 | Not Available | Negative | 2276739 - 2276987 | 9408.04 |
| cina family protein | VAPA_RS10600 | Not Available | Negative | 2277002 - 2277520 | 17501.9 |
| acetoacetyl-coa reductase | VAPA_RS10605 | Not Available | Positive | 2277745 - 2278482 | 25929.1 |
| ybal family putative k(+) efflux transporter | VAPA_RS10610 | Not Available | Positive | 2278614 - 2280311 | 59582.0 |
| hypothetical protein | VAPA_RS10615 | Not Available | Negative | 2280336 - 2280740 | 14781.7 |
| homoserine dehydrogenase | VAPA_RS10620 | Not Available | Positive | 2281131 - 2282489 | 46917.1 |
| duf1090 family protein | VAPA_RS10625 | Not Available | Positive | 2282595 - 2282936 | 12597.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
