Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | VAPA_RS10530 | Not Available | Negative | 2264084 - 2264635 | 20846.9 |
| fumarylacetoacetate hydrolase family protein | VAPA_RS10535 | Not Available | Negative | 2264655 - 2265359 | 25017.9 |
| maleylacetoacetate isomerase | VAPA_RS10540 | Not Available | Positive | 2265449 - 2266087 | 24047.8 |
| peptidoglycan editing factor pgef | VAPA_RS10545 | Not Available | Positive | 2266102 - 2266881 | 26975.1 |
| hypothetical protein | VAPA_RS10550 | Not Available | Negative | 2266813 - 2267136 | 11426.9 |
| class i poly(r)-hydroxyalkanoic acid synthase | VAPA_RS10555 | Not Available | Positive | 2267249 - 2269000 | 64056.2 |
| acetyl-coa c-acetyltransferase | VAPA_RS10560 | Not Available | Positive | 2269052 - 2270230 | 40219.8 |
| lysr family transcriptional regulator | VAPA_RS10565 | Not Available | Negative | 2270657 - 2271568 | 33499.7 |
| tripartite tricarboxylate transporter substrate binding protein | VAPA_RS10570 | Not Available | Positive | 2271676 - 2272650 | 33612.9 |
| maoc family dehydratase n-terminal domain-containing protein | VAPA_RS10575 | Not Available | Positive | 2272659 - 2273567 | 33351.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
