Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | VAPA_RS10480 | Not Available | Positive | 2256283 - 2256756 | 16653.9 |
| isochorismatase family cysteine hydrolase | VAPA_RS10485 | Not Available | Negative | 2256776 - 2257378 | 21590.1 |
| hypothetical protein | VAPA_RS10490 | Not Available | Negative | 2257484 - 2257687 | 7335.63 |
| duf3182 family protein | VAPA_RS10495 | Not Available | Positive | 2258071 - 2259243 | 41766.2 |
| alpha/beta hydrolase family protein | VAPA_RS10500 | Not Available | Positive | 2259224 - 2260003 | 28302.9 |
| hypothetical protein | VAPA_RS10505 | Not Available | Positive | 2260025 - 2260510 | 16991.6 |
| hemerythrin domain-containing protein | VAPA_RS10510 | Not Available | Positive | 2260638 - 2261132 | 18434.7 |
| phospholipase d family protein | VAPA_RS10515 | Not Available | Positive | 2261284 - 2262939 | 60584.6 |
| murein hydrolase activator envc family protein | VAPA_RS10520 | Not Available | Negative | 2262969 - 2263472 | 17858.6 |
| crea family protein | VAPA_RS10525 | Not Available | Negative | 2263569 - 2264075 | 17980.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
