Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | VAPA_RS10390 | Not Available | Positive | 2233185 - 2235236 | 77557.5 |
| maltose alpha-d-glucosyltransferase | VAPA_RS10395 | Not Available | Positive | 2235247 - 2238576 | 125512.0 |
| mechanosensitive ion channel family protein | VAPA_RS10400 | Not Available | Positive | 2238635 - 2239354 | 26119.3 |
| glycogen debranching protein glgx | VAPA_RS10405 | Not Available | Positive | 2239381 - 2241546 | 81039.0 |
| malto-oligosyltrehalose trehalohydrolase | VAPA_RS10410 | Not Available | Positive | 2241543 - 2243381 | 66652.3 |
| malto-oligosyltrehalose synthase | VAPA_RS10415 | Not Available | Positive | 2243374 - 2248434 | 185824.0 |
| hnh endonuclease | VAPA_RS10420 | Not Available | Positive | 2248778 - 2249134 | 12852.5 |
| hypothetical protein | VAPA_RS34435 | Not Available | Positive | 2249358 - 2249609 | 9398.02 |
| helix-turn-helix domain-containing protein | VAPA_RS10425 | Not Available | Negative | 2249583 - 2250155 | 20598.9 |
| helix-turn-helix domain-containing protein | VAPA_RS10430 | Not Available | Positive | 2250418 - 2250723 | 11330.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
