Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gspe/pule family protein | VAPA_RS10340 | Not Available | Negative | 2221436 - 2223328 | 69962.8 |
| pas domain-containing protein | VAPA_RS10345 | Not Available | Negative | 2223438 - 2226485 | 110750.0 |
| erythromycin esterase family protein | VAPA_RS10350 | Not Available | Negative | 2226636 - 2227982 | 50058.5 |
| phosphoribosyltransferase | VAPA_RS10355 | Not Available | Negative | 2227995 - 2228660 | 23915.6 |
| hypothetical protein | VAPA_RS10360 | Not Available | Negative | 2228787 - 2229125 | 11985.4 |
| hsp20/alpha crystallin family protein | VAPA_RS10365 | Not Available | Negative | 2229166 - 2229579 | 14584.1 |
| hsp20/alpha crystallin family protein | VAPA_RS10370 | Not Available | Negative | 2229609 - 2230046 | 16117.2 |
| hypothetical protein | VAPA_RS10375 | Not Available | Positive | 2230318 - 2230668 | 12506.4 |
| hypothetical protein | VAPA_RS10380 | Not Available | Positive | 2230775 - 2231095 | 11685.8 |
| 1,4-alpha-glucan branching protein glgb | VAPA_RS10385 | Not Available | Positive | 2231290 - 2233188 | 71672.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
