Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease subunit | VAPA_RS10240 | Not Available | Negative | 2202458 - 2204353 | 66354.7 |
| trap transporter substrate-binding protein | VAPA_RS10245 | Not Available | Negative | 2204360 - 2205379 | 36919.4 |
| laci family dna-binding transcriptional regulator | VAPA_RS10250 | Not Available | Positive | 2205504 - 2206559 | 38305.1 |
| 4-hydroxy-2-oxoheptanedioate aldolase | VAPA_RS10255 | Not Available | Negative | 2206585 - 2207388 | 27653.3 |
| nad-dependent succinate-semialdehyde dehydrogenase | VAPA_RS10260 | Not Available | Negative | 2207426 - 2208895 | 51785.8 |
| uxaa family hydrolase | VAPA_RS10265 | Not Available | Negative | 2208931 - 2210454 | 54097.7 |
| tripartite tricarboxylate transporter substrate binding protein | VAPA_RS10270 | Not Available | Negative | 2210454 - 2211449 | 35419.6 |
| lysr substrate-binding domain-containing protein | VAPA_RS10275 | Not Available | Positive | 2211584 - 2212525 | 34644.6 |
| crp/fnr family transcriptional regulator | VAPA_RS10280 | Not Available | Positive | 2212591 - 2213031 | 15864.2 |
| nudix domain-containing protein | VAPA_RS10285 | Not Available | Negative | 2213040 - 2214341 | 46380.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
