Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transferase | VAPA_RS33845 | Not Available | Positive | 2181329 - 2182036 | 26909.4 |
| nad-dependent epimerase/dehydratase family protein | VAPA_RS10175 | Not Available | Positive | 2182086 - 2183219 | 40322.5 |
| hypothetical protein | VAPA_RS34420 | Not Available | Positive | 2183312 - 2184343 | 39640.8 |
| hypothetical protein | VAPA_RS10180 | Not Available | Positive | 2184428 - 2185726 | 48549.8 |
| lipopolysaccharide biosynthesis protein | VAPA_RS34425 | Not Available | Positive | 2185733 - 2187004 | 46593.4 |
| hypothetical protein | VAPA_RS34430 | Not Available | Positive | 2187016 - 2188275 | 47519.1 |
| 3-deoxy-8-phosphooctulonate synthase | VAPA_RS10185 | Not Available | Positive | 2188327 - 2189172 | 30585.2 |
| sis domain-containing protein | VAPA_RS10190 | Not Available | Positive | 2189277 - 2190227 | 33735.7 |
| daph/dapd/glmu-related protein | VAPA_RS33850 | Not Available | Positive | 2190284 - 2190844 | 20947.8 |
| yran family protein | VAPA_RS35530 | Not Available | Negative | 2191043 - 2191150 | 3967.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
