Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | VAPA_RS10125 | Not Available | Negative | 2169127 - 2169981 | 30383.2 |
| pas domain-containing protein | VAPA_RS10130 | Not Available | Negative | 2170234 - 2171805 | 56428.8 |
| lysr family transcriptional regulator | VAPA_RS10135 | Not Available | Negative | 2171879 - 2172775 | 31956.5 |
| hydrolase | VAPA_RS10140 | Not Available | Positive | 2172899 - 2173552 | 23779.5 |
| hypothetical protein | VAPA_RS10145 | Not Available | Negative | 2173586 - 2174059 | 16401.0 |
| spore coat protein u domain-containing protein | VAPA_RS10150 | Not Available | Negative | 2174193 - 2175212 | 35205.4 |
| fimbria/pilus outer membrane usher protein | VAPA_RS10155 | Not Available | Negative | 2175209 - 2177533 | 81859.5 |
| molecular chaperone | VAPA_RS10160 | Not Available | Negative | 2177568 - 2178296 | 26137.7 |
| spore coat u domain-containing protein | VAPA_RS10165 | Not Available | Negative | 2178311 - 2178820 | 16541.3 |
| polysaccharide biosynthesis/export family protein | VAPA_RS10170 | Not Available | Positive | 2180000 - 2181073 | 38385.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
