Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS10025 | Not Available | Positive | 2148627 - 2149595 | 33643.2 |
| taud/tfda dioxygenase family protein | VAPA_RS10030 | Not Available | Positive | 2149627 - 2150469 | 31591.7 |
| 3-keto-5-aminohexanoate cleavage protein | VAPA_RS10035 | Not Available | Positive | 2150520 - 2151578 | 38553.2 |
| arac family transcriptional regulator | VAPA_RS10040 | Not Available | Negative | 2151670 - 2152710 | 38540.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS10045 | Not Available | Negative | 2152736 - 2153722 | 35082.0 |
| 3-keto-5-aminohexanoate cleavage protein | VAPA_RS10050 | Not Available | Positive | 2153975 - 2155033 | 38922.6 |
| rieske 2fe-2s domain-containing protein | VAPA_RS10055 | Not Available | Positive | 2155131 - 2155520 | 13798.8 |
| nad(p)/fad-dependent oxidoreductase | VAPA_RS10060 | Not Available | Negative | 2155553 - 2156770 | 43512.9 |
| non-heme iron oxygenase ferredoxin subunit | VAPA_RS10065 | Not Available | Negative | 2156838 - 2157161 | 11619.7 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | VAPA_RS10070 | Not Available | Negative | 2157170 - 2157640 | 18319.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
