Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-(methylthio)propionyl-coa ligase | VAPA_RS09975 | Not Available | Negative | 2135845 - 2137500 | 60319.3 |
| quinone oxidoreductase family protein | VAPA_RS09980 | Not Available | Negative | 2137540 - 2138511 | 34259.6 |
| rbbp9/yden family alpha/beta hydrolase | VAPA_RS09985 | Not Available | Negative | 2138552 - 2139115 | 19929.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS09990 | Not Available | Negative | 2139134 - 2140105 | 34024.6 |
| 3-keto-5-aminohexanoate cleavage protein | VAPA_RS09995 | Not Available | Negative | 2140137 - 2141195 | 38814.4 |
| taud/tfda dioxygenase family protein | VAPA_RS10000 | Not Available | Negative | 2141253 - 2142101 | 31925.1 |
| luxr c-terminal-related transcriptional regulator | VAPA_RS10005 | Not Available | Negative | 2142304 - 2144976 | 96731.4 |
| arac family transcriptional regulator | VAPA_RS10010 | Not Available | Negative | 2145032 - 2146072 | 38056.9 |
| porin | VAPA_RS10015 | Not Available | Positive | 2146194 - 2147429 | 42948.9 |
| quinone oxidoreductase family protein | VAPA_RS10020 | Not Available | Negative | 2147458 - 2148429 | 34300.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
