Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | VAPA_RS09925 | Not Available | Negative | 2126573 - 2127625 | 37453.4 |
| sigma factor | VAPA_RS09930 | Not Available | Negative | 2127772 - 2128341 | 20734.6 |
| nucleotidyl transferase abieii/abigii toxin family protein | VAPA_RS09935 | Not Available | Negative | 2128495 - 2129448 | 35116.3 |
| abiei antitoxin n-terminal domain-containing protein | VAPA_RS09940 | Not Available | Negative | 2129445 - 2130056 | 22241.3 |
| fadr/gntr family transcriptional regulator | VAPA_RS09945 | Not Available | Negative | 2130719 - 2131693 | 36167.8 |
| helix-turn-helix domain-containing protein | VAPA_RS09950 | Not Available | Negative | 2131724 - 2131969 | 8681.74 |
| helix-turn-helix domain-containing protein | VAPA_RS09955 | Not Available | Positive | 2132204 - 2132740 | 19252.3 |
| yran family protein | VAPA_RS35100 | Not Available | Positive | 2133070 - 2133424 | 13955.8 |
| glutathione s-transferase family protein | VAPA_RS09965 | Not Available | Positive | 2133755 - 2134426 | 25147.5 |
| porin | VAPA_RS09970 | Not Available | Negative | 2134610 - 2135848 | 43119.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
