Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | VAPA_RS09880 | Not Available | Positive | 2118621 - 2119907 | 45256.2 |
| outer membrane lipoprotein-sorting protein | VAPA_RS09885 | Not Available | Positive | 2119923 - 2120651 | 27630.9 |
| hypothetical protein | VAPA_RS09890 | Not Available | Positive | 2120648 - 2121952 | 48705.6 |
| yran family protein | VAPA_RS09895 | Not Available | Negative | 2122039 - 2122755 | 24590.9 |
| chromate efflux transporter | VAPA_RS09900 | Not Available | Positive | 2122906 - 2124111 | 41913.0 |
| padr family transcriptional regulator | VAPA_RS09905 | Not Available | Positive | 2124121 - 2124426 | 11421.0 |
| cation diffusion facilitator family transporter | VAPA_RS09910 | Not Available | Negative | 2124389 - 2125333 | 33558.9 |
| osmc family protein | VAPA_RS09915 | Not Available | Negative | 2125330 - 2125749 | 15224.5 |
| thioredoxin family protein | VAPA_RS09920 | Not Available | Negative | 2125826 - 2126059 | 8238.27 |
| hypothetical protein | VAPA_RS34415 | Not Available | Negative | 2126083 - 2126535 | 16347.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
