Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | VAPA_RS09705 | Not Available | Positive | 2092765 - 2093379 | 23023.1 |
| 50s ribosomal protein l35 | VAPA_RS09710 | Not Available | Positive | 2093544 - 2093747 | 7482.51 |
| 50s ribosomal protein l20 | VAPA_RS09715 | Not Available | Positive | 2093772 - 2094131 | 13420.7 |
| phenylalanine--trna ligase subunit alpha | VAPA_RS09720 | Not Available | Positive | 2094245 - 2095321 | 40023.3 |
| phenylalanine--trna ligase subunit beta | VAPA_RS09725 | Not Available | Positive | 2095365 - 2097806 | 88096.0 |
| integration host factor subunit alpha | VAPA_RS09730 | Not Available | Positive | 2097812 - 2098183 | 13492.0 |
| merr family transcriptional regulator | VAPA_RS09735 | Not Available | Positive | 2098249 - 2098725 | 18627.4 |
| Trna-pro | Not Available | Not Available | Positive | 2098752 - 2098828 | Not Available |
| tyrosine recombinase xerc | VAPA_RS09745 | Not Available | Negative | 2098927 - 2100096 | 43878.7 |
| molecular chaperone dnaj | VAPA_RS09750 | Not Available | Negative | 2100093 - 2100749 | 23896.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
