Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | VAPA_RS09655 | Not Available | Negative | 2082073 - 2083056 | 33983.0 |
| tetr/acrr family transcriptional regulator | VAPA_RS09660 | Not Available | Negative | 2083213 - 2083869 | 25115.2 |
| thiamine pyrophosphate-binding protein | VAPA_RS09665 | Not Available | Positive | 2083963 - 2085687 | 61550.4 |
| hypothetical protein | VAPA_RS33825 | Not Available | Negative | 2085653 - 2085946 | 10412.5 |
| arac family transcriptional regulator | VAPA_RS09675 | Not Available | Positive | 2086050 - 2086829 | 28137.8 |
| swib/mdm2 domain-containing protein | VAPA_RS09680 | Not Available | Negative | 2086869 - 2087312 | 15171.0 |
| dmt family transporter | VAPA_RS09685 | Not Available | Negative | 2087467 - 2088390 | 32127.4 |
| gamma-glutamylcyclotransferase | VAPA_RS09690 | Not Available | Positive | 2088427 - 2088855 | 15523.3 |
| isocitrate lyase | VAPA_RS09695 | Not Available | Positive | 2089109 - 2090428 | 48509.4 |
| threonine--trna ligase | VAPA_RS09700 | Not Available | Positive | 2090753 - 2092660 | 72335.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
