Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine dehydrogenase | VAPA_RS09455 | Not Available | Positive | 2042428 - 2043750 | 46514.6 |
| threonine synthase | VAPA_RS09460 | Not Available | Positive | 2043772 - 2045187 | 51783.7 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | VAPA_RS09465 | Not Available | Positive | 2045271 - 2045816 | 20118.8 |
| gephyrin-like molybdotransferase glp | VAPA_RS09470 | Not Available | Positive | 2045809 - 2047086 | 44468.6 |
| molybdopterin converting factor subunit 1 | VAPA_RS09475 | Not Available | Positive | 2047099 - 2047350 | 8562.26 |
| 4-hydroxy-tetrahydrodipicolinate synthase | VAPA_RS09480 | Not Available | Negative | 2047337 - 2048335 | 35128.1 |
| molybdenum cofactor biosynthesis protein moae | VAPA_RS09485 | Not Available | Positive | 2048489 - 2048965 | 17392.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS09490 | Not Available | Negative | 2048962 - 2049954 | 34971.6 |
| atp-dependent chaperone clpb | VAPA_RS09495 | Not Available | Positive | 2050065 - 2052686 | 95954.5 |
| hypothetical protein | VAPA_RS09500 | Not Available | Positive | 2052696 - 2053034 | 12045.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
