Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b/b6 domain-containing protein | VAPA_RS09355 | Not Available | Positive | 2024880 - 2025434 | 20487.1 |
| bacterioferritin | VAPA_RS09360 | Not Available | Negative | 2025459 - 2025935 | 18097.7 |
| alkyl hydroperoxide reductase subunit c | VAPA_RS09365 | Not Available | Positive | 2026180 - 2026752 | 20986.8 |
| alkyl hydroperoxide reductase subunit f | VAPA_RS09370 | Not Available | Positive | 2026844 - 2028415 | 56209.6 |
| pyruvate, water dikinase regulatory protein | VAPA_RS09375 | Not Available | Negative | 2028452 - 2029273 | 30855.2 |
| phosphoenolpyruvate synthase | VAPA_RS09380 | Not Available | Positive | 2029465 - 2031858 | 86669.8 |
| hypothetical protein | VAPA_RS09385 | Not Available | Positive | 2032077 - 2032610 | 18336.1 |
| 30s ribosomal protein s6 | VAPA_RS09390 | Not Available | Positive | 2032725 - 2033099 | 14207.1 |
| primosomal replication protein n | VAPA_RS09395 | Not Available | Positive | 2033104 - 2033421 | 11024.3 |
| 30s ribosomal protein s18 | VAPA_RS09400 | Not Available | Positive | 2033443 - 2033724 | 11040.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
