Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | VAPA_RS00790 | Not Available | Negative | 161082 - 161981 | 32691.8 |
| bon domain-containing protein | VAPA_RS00795 | Not Available | Negative | 162010 - 162510 | 18227.2 |
| flavin reductase family protein | VAPA_RS00800 | Not Available | Negative | 162507 - 163016 | 17946.2 |
| nucleoside recognition domain-containing protein | VAPA_RS00805 | Not Available | Negative | 163122 - 164351 | 43071.2 |
| phospholipase d family protein | VAPA_RS00810 | Not Available | Positive | 164425 - 166008 | 57783.4 |
| abc transporter substrate-binding protein | VAPA_RS00815 | Not Available | Positive | 166110 - 167270 | 40109.4 |
| abc transporter atp-binding protein | VAPA_RS00820 | Not Available | Negative | 167287 - 167991 | 25669.1 |
| abc transporter atp-binding protein | VAPA_RS00825 | Not Available | Negative | 167984 - 168751 | 27451.5 |
| branched-chain amino acid abc transporter permease | VAPA_RS00830 | Not Available | Negative | 168748 - 169710 | 34268.2 |
| branched-chain amino acid abc transporter permease | VAPA_RS00835 | Not Available | Negative | 170036 - 170896 | 30015.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
