Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpp family protein | VAPA_RS09110 | Not Available | Negative | 1979171 - 1980304 | 41193.3 |
| multidrug effflux mfs transporter | VAPA_RS09115 | Not Available | Negative | 1980309 - 1981544 | 44491.4 |
| rna polymerase sigma factor rpod | VAPA_RS09120 | Not Available | Negative | 1981645 - 1983912 | 84040.5 |
| hypothetical protein | VAPA_RS35090 | Not Available | Positive | 1983827 - 1984201 | 12944.0 |
| dna primase | VAPA_RS09125 | Not Available | Negative | 1984326 - 1986305 | 72312.9 |
| yihy/virulence factor brkb family protein | VAPA_RS09130 | Not Available | Positive | 1986388 - 1987329 | 34328.9 |
| 3-hydroxyacyl-coa dehydrogenase | VAPA_RS09135 | Not Available | Negative | 1987277 - 1988035 | 25858.4 |
| phasin family protein | VAPA_RS09140 | Not Available | Negative | 1988262 - 1988813 | 18923.2 |
| histone deacetylase | VAPA_RS09145 | Not Available | Positive | 1989003 - 1989929 | 33884.1 |
| acyl-coa thioesterase | VAPA_RS09150 | Not Available | Positive | 1989926 - 1990369 | 16381.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
