Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | VAPA_RS09060 | Not Available | Positive | 1969624 - 1970388 | 27561.6 |
| abc transporter atp-binding protein | VAPA_RS09065 | Not Available | Positive | 1970381 - 1971085 | 25206.7 |
| tannase/feruloyl esterase family alpha/beta hydrolase | VAPA_RS09070 | Not Available | Positive | 1971160 - 1972857 | 59382.7 |
| dsba family protein | VAPA_RS09075 | Not Available | Negative | 1972877 - 1973623 | 26133.0 |
| yran family protein | VAPA_RS09080 | Not Available | Negative | 1973617 - 1974510 | 31877.4 |
| lysr family transcriptional regulator | VAPA_RS09085 | Not Available | Negative | 1974632 - 1975549 | 33018.0 |
| hydroxymethylglutaryl-coa lyase | VAPA_RS09090 | Not Available | Positive | 1975648 - 1976595 | 33221.2 |
| caib/baif coa transferase family protein | VAPA_RS09095 | Not Available | Positive | 1976592 - 1977797 | 43257.4 |
| tripartite tricarboxylate transporter substrate binding protein | VAPA_RS09100 | Not Available | Positive | 1977831 - 1978820 | 33888.5 |
| quaternary ammonium compound efflux smr transporter suge | VAPA_RS09105 | Not Available | Negative | 1978831 - 1979151 | 11041.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
