Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactonase family protein | VAPA_RS08910 | Not Available | Negative | 1936061 - 1937155 | 38348.5 |
| sdr family nad(p)-dependent oxidoreductase | VAPA_RS08915 | Not Available | Negative | 1937171 - 1937932 | 26450.7 |
| galactarate dehydratase | VAPA_RS08920 | Not Available | Negative | 1937959 - 1939551 | 56523.0 |
| lactonase family protein | VAPA_RS08925 | Not Available | Negative | 1939565 - 1940575 | 35007.8 |
| trap transporter large permease | VAPA_RS08930 | Not Available | Negative | 1940589 - 1941872 | 45188.0 |
| trap transporter small permease | VAPA_RS08935 | Not Available | Negative | 1941872 - 1942399 | 19147.0 |
| trap transporter substrate-binding protein | VAPA_RS08940 | Not Available | Negative | 1942443 - 1943435 | 35849.6 |
| nad-dependent epimerase/dehydratase family protein | VAPA_RS08945 | Not Available | Negative | 1943498 - 1944322 | 30360.0 |
| fadr/gntr family transcriptional regulator | VAPA_RS08950 | Not Available | Positive | 1944385 - 1945200 | 29440.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS08955 | Not Available | Positive | 1945281 - 1946255 | 34098.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
