Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii-like protein | VAPA_RS08810 | Not Available | Negative | 1916521 - 1916841 | 11393.4 |
| voc family protein | VAPA_RS08815 | Not Available | Negative | 1916860 - 1917249 | 13941.3 |
| gnat family n-acetyltransferase | VAPA_RS08820 | Not Available | Negative | 1917275 - 1917778 | 18900.7 |
| s-formylglutathione hydrolase | VAPA_RS08825 | Not Available | Negative | 1917815 - 1918690 | 31525.5 |
| alpha/beta fold hydrolase | VAPA_RS08830 | Not Available | Negative | 1918687 - 1919610 | 33770.1 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | VAPA_RS08835 | Not Available | Negative | 1919632 - 1920738 | 39635.1 |
| glutathione s-transferase family protein | VAPA_RS08840 | Not Available | Negative | 1920781 - 1921419 | 23478.8 |
| aromatic ring-hydroxylating oxygenase subunit alpha | VAPA_RS08845 | Not Available | Negative | 1921416 - 1922279 | 31774.7 |
| rieske 2fe-2s domain-containing protein | VAPA_RS08850 | Not Available | Negative | 1922293 - 1922970 | 23565.0 |
| type ii 3-dehydroquinate dehydratase | VAPA_RS08855 | Not Available | Positive | 1923026 - 1923466 | 15719.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
