Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | VAPA_RS07890 | Not Available | Positive | 1732630 - 1733793 | 40862.6 |
| branched-chain amino acid abc transporter permease | VAPA_RS07895 | Not Available | Positive | 1733837 - 1734892 | 36332.8 |
| atp-binding cassette domain-containing protein | VAPA_RS07900 | Not Available | Positive | 1734889 - 1736676 | 63276.7 |
| abc transporter atp-binding protein | VAPA_RS07905 | Not Available | Positive | 1736759 - 1737490 | 26247.8 |
| atp-dependent acyl-coa ligase | VAPA_RS07910 | Not Available | Positive | 1737480 - 1739084 | 57320.4 |
| sdr family nad(p)-dependent oxidoreductase | VAPA_RS07915 | Not Available | Positive | 1739081 - 1739842 | 25607.5 |
| sdr family nad(p)-dependent oxidoreductase | VAPA_RS07920 | Not Available | Positive | 1739895 - 1740671 | 26248.3 |
| marr family winged helix-turn-helix transcriptional regulator | VAPA_RS07925 | Not Available | Positive | 1740671 - 1741198 | 20158.2 |
| acyl-coa thioesterase | VAPA_RS07930 | Not Available | Positive | 1741198 - 1741656 | 16721.3 |
| hypothetical protein | VAPA_RS07935 | Not Available | Negative | 1741663 - 1742055 | 14459.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
