Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | VAPA_RS00400 | Not Available | Positive | 79719 - 80429 | 26390.5 |
| nad(p)/fad-dependent oxidoreductase | VAPA_RS00405 | Not Available | Negative | 80461 - 82263 | 66741.1 |
| hypothetical protein | VAPA_RS35000 | Not Available | Negative | 82451 - 82543 | 3379.27 |
| yran family protein | VAPA_RS00410 | Not Available | Negative | 82527 - 84461 | 69321.6 |
| abc transporter atp-binding protein | VAPA_RS00415 | Not Available | Negative | 84547 - 85248 | 25290.0 |
| abc transporter atp-binding protein | VAPA_RS00420 | Not Available | Negative | 85250 - 85999 | 26748.1 |
| branched-chain amino acid abc transporter permease | VAPA_RS00425 | Not Available | Negative | 85996 - 86970 | 34215.2 |
| branched-chain amino acid abc transporter permease | VAPA_RS00430 | Not Available | Negative | 86967 - 87839 | 31431.8 |
| abc transporter substrate-binding protein | VAPA_RS00435 | Not Available | Negative | 87994 - 89166 | 41217.5 |
| alpha/beta fold hydrolase | VAPA_RS00440 | Not Available | Negative | 89163 - 89966 | 30105.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
