Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | strain FDAARGOS_776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3953 genes
Non-Coding Genes
597 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Inner membrane protein ypjd | FIU04_19490 | Not Available | Positive | 3848781 - 3849572 | 29263.9 |
| Hlyc/corc family transporter | FIU04_19495 | Not Available | Positive | 3849593 - 3850879 | 48047.2 |
| Heat shock protein | FIU04_19500 | Not Available | Negative | 3850934 - 3851527 | 21813.1 |
| Dna repair protein recn | FIU04_19505 | Not Available | Positive | 3851650 - 3852528 | 32568.3 |
| Dna repair protein recn | FIU04_19510 | Not Available | Positive | 3852614 - 3854275 | 61400.1 |
| Outer membrane protein assembly factor bame | FIU04_19515 | Not Available | Positive | 3854424 - 3854765 | 12302.8 |
| Is4 transposase | FIU04_19520 | Not Available | Negative | 3854824 - 3856152 | 50359.8 |
| Rnfh family protein | FIU04_19525 | Not Available | Negative | 3856264 - 3856554 | 10806.0 |
| Type ii toxin-antitoxin system toxin rata | FIU04_19530 | Not Available | Negative | 3856544 - 3857020 | 17743.7 |
| Ssra-binding protein | FIU04_19535 | Not Available | Positive | 3857152 - 3857634 | 18270.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






