Shigella sonnei strain FDAARGOS_776

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella sonnei strain FDAARGOS_776 is a Gram-negative bacterium characterized by its rod shape and a lack of mobility. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. It is a chemoorganotroph, deriving its energy from organic compounds. The optimal growth temperature for S. sonnei is 37°C, indicating its mesophilic nature, which aligns with typical human body temperatures, making it well-adapted to its hosts. S. sonnei primarily associates with Homo sapiens, as well as other metazoans, including Pteropodidae. This relationship underlines its role as a pathogen, as it is known to cause various health effects, particularly diarrheal diseases such as shigellosis, enterocolitis, and dysentery. The presence of two membranes indicates its classification as a Gram-negative bacterium, which is significant for its pathogenic mechanisms and resistance to certain antibiotics. The strain has a single replicon, which is typical for many bacteria, facilitating its replication and survival in host environments. S. sonnei is also free-living, suggesting it can exist independently in various habitats associated with its hosts. This adaptability may enhance its potential for transmission and survival outside of direct host interactions. In summary, the ecological and pathogenic traits of Shigella sonnei strain FDAARGOS_776 highlight its significant role in human health, particularly in causing gastrointestinal illnesses, while its habitat and nutritional adaptations underscore its evolutionary success in diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella sonnei
Strainstrain FDAARGOS_776

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella sonnei strain FDAARGOS_776
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Pteropodidae
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella sonnei strain FDAARGOS_776


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4004 genes

Non-Coding Genes

546 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dipeptide/tripeptide permease dtpaFIU04_01230Not AvailablePositive248915 - 25041754008.4
glutathione s-transferaseFIU04_01235Not AvailablePositive250522 - 2506595013.28
is4-like element is4 family transposaseFIU04_01240Not AvailablePositive250727 - 25205550359.8
pyridoxal kinase pdxyFIU04_01250Not AvailableNegative252610 - 25347031220.9
tyrosine--trna ligaseFIU04_01255Not AvailableNegative253532 - 25480647529.6
pyridoxamine 5'-phosphate oxidaseFIU04_01260Not AvailableNegative254935 - 25559125560.6
c-type lysozyme inhibitorFIU04_01265Not AvailableNegative255650 - 25597912495.2
anhydro-n-acetylmuramic acid kinaseFIU04_01270Not AvailableNegative256077 - 25718639526.7
outer membrane lipoprotein slybFIU04_01275Not AvailablePositive257460 - 25792715602.7
transcriptional regulator slyaFIU04_01280Not AvailableNegative257974 - 25840816354.0

Displaying genes 781 – 790 of 4550 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ShigellosisCausesPMC2600399
ShigellosisCausesPMC5177732
Diarrheal diseaseCausesPMC5177732
ShigellosisCausesPMC6038740
ShigellosisCausesPMC2271788
ShigellosisCausesPMC5447701
Bacterial dysenteryCausesPMC5447701
DiarrheaCausesPMC8886675
DysenteryCausesPMC8886675
ShigellosisCausesPMC8886675

Displaying health effects 1 – 10 of 11 in total