Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | strain FDAARGOS_776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3953 genes
Non-Coding Genes
597 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | FIU04_20990 | Not Available | Negative | 4143518 - 4144252 | 28722.6 |
| sensor histidine kinase | FIU04_20995 | Not Available | Negative | 4144267 - 4145964 | 62719.3 |
| alanine transaminase | FIU04_21000 | Not Available | Positive | 4146341 - 4147579 | 46248.8 |
| membrane protein ypdk | FIU04_21005 | Not Available | Negative | 4147644 - 4147715 | 2704.57 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | FIU04_21010 | Not Available | Negative | 4148070 - 4148990 | 35479.4 |
| duf2545 family protein | FIU04_21015 | Not Available | Positive | 4149343 - 4149585 | 8923.5 |
| colanic acid biosynthesis lipoprotein ypdi | FIU04_21020 | Not Available | Negative | 4149662 - 4149937 | 10210.5 |
| yfdx family protein | FIU04_21025 | Not Available | Positive | 4150234 - 4150857 | 22552.0 |
| formyl-coa--oxalate coa-transferase | FIU04_21030 | Not Available | Positive | 4151370 - 4152620 | 45820.7 |
| oxalyl-coa decarboxylase | FIU04_21035 | Not Available | Positive | 4152674 - 4154368 | 60584.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






