Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | strain FDAARGOS_776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3953 genes
Non-Coding Genes
597 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | FIU04_14865 | Not Available | Positive | 2954547 - 2955614 | 38860.6 |
| ribosome-associated atpase | FIU04_14870 | Not Available | Positive | 2955611 - 2958346 | 100818.0 |
| abc-2 transporter permease | FIU04_14875 | Not Available | Positive | 2958346 - 2959470 | 41036.1 |
| type ii toxin-antitoxin system hicb family antitoxin | FIU04_14885 | Not Available | Positive | 2959813 - 2960172 | 13403.0 |
| nickel-responsive transcriptional regulator nikr | FIU04_14890 | Not Available | Negative | 2960292 - 2960693 | 15094.7 |
| nickel import atp-binding protein nike | FIU04_14895 | Not Available | Negative | 2960699 - 2961505 | 29695.5 |
| nickel import atp-binding protein nikd | FIU04_14900 | Not Available | Negative | 2961502 - 2962266 | 26855.2 |
| nickel abc transporter permease subunit nikc | FIU04_14905 | Not Available | Negative | 2962266 - 2963099 | 30363.8 |
| nickel abc transporter permease subunit nikb | FIU04_14910 | Not Available | Negative | 2963096 - 2964040 | 35250.3 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | FIU04_14915 | Not Available | Negative | 2964040 - 2965614 | 58849.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






