Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | strain FDAARGOS_776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3953 genes
Non-Coding Genes
597 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-carnitine/gamma-butyrobetaine antiporter | FIU04_09555 | Not Available | Positive | 1871372 - 1872886 | 56590.4 |
| crotonobetainyl-coa dehydrogenase | FIU04_09560 | Not Available | Positive | 1872917 - 1874059 | 42560.8 |
| crotonobetaine/carnitine-coa ligase | FIU04_09570 | Not Available | Positive | 1875479 - 1877032 | 58522.3 |
| crotonobetainyl-coa hydratase | FIU04_09575 | Not Available | Positive | 1877141 - 1877926 | 28175.8 |
| carnitine operon protein caie | FIU04_09580 | Not Available | Positive | 1877932 - 1878522 | 21157.6 |
| carnitine metabolism transcriptional regulator caif | FIU04_09585 | Not Available | Negative | 1878731 - 1879126 | 15335.0 |
| carbamoyl-phosphate synthase large subunit | FIU04_09595 | Not Available | Negative | 1880164 - 1883385 | 117877.0 |
| carbamoyl-phosphate synthase small subunit | FIU04_09600 | Not Available | Negative | 1883403 - 1884551 | 41433.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | FIU04_09605 | Not Available | Negative | 1885007 - 1885828 | 28784.4 |
| ribonucleoside hydrolase rihc | FIU04_09610 | Not Available | Negative | 1885995 - 1886909 | 32563.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






