Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | strain FDAARGOS_776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3953 genes
Non-Coding Genes
597 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | FIU04_08570 | Not Available | Positive | 1656476 - 1657807 | 49981.9 |
| dotu family type iv/vi secretion system protein | FIU04_08575 | Not Available | Positive | 1657812 - 1658573 | 29350.7 |
| type vi secretion system atpase tssh | FIU04_08580 | Not Available | Positive | 1658582 - 1661359 | 101488.0 |
| type vi secretion system-associated protein tago | FIU04_08585 | Not Available | Positive | 1661356 - 1662099 | 26462.8 |
| type vi secretion system protein tssa | FIU04_08590 | Not Available | Positive | 1662104 - 1663516 | 52362.2 |
| hypothetical protein | FIU04_08600 | Not Available | Positive | 1667070 - 1668422 | 50697.4 |
| hcp family type vi secretion system effector | FIU04_08605 | Not Available | Positive | 1668446 - 1668928 | 18000.5 |
| hypothetical protein | FIU04_08615 | Not Available | Positive | 1669937 - 1670416 | 18187.0 |
| hypothetical protein | FIU04_08620 | Not Available | Negative | 1670553 - 1671338 | 29658.3 |
| Trna-asp | Not Available | Not Available | Positive | 1671668 - 1671744 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






