Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | strain FDAARGOS_776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3953 genes
Non-Coding Genes
597 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21-like element issso4 family transposase | FIU04_08515 | Not Available | Negative | 1644251 - 1645786 | 58998.3 |
| type vi secretion system tip protein vgrg | FIU04_08520 | Not Available | Negative | 1646001 - 1647617 | 61368.0 |
| hcp family type vi secretion system effector | FIU04_08525 | Not Available | Negative | 1647827 - 1648345 | 19242.8 |
| type vi secretion system contractile sheath small subunit | FIU04_08530 | Not Available | Positive | 1649042 - 1649542 | 18047.5 |
| hypothetical protein | FIU04_08535 | Not Available | Positive | 1649577 - 1649801 | 8411.01 |
| type vi secretion system baseplate subunit tsse | FIU04_08545 | Not Available | Positive | 1651334 - 1651747 | 15494.0 |
| type vi secretion system baseplate subunit tssf | FIU04_08550 | Not Available | Positive | 1651751 - 1653601 | 71182.0 |
| type vi secretion system baseplate subunit tssg | FIU04_08555 | Not Available | Positive | 1653565 - 1654647 | 40218.1 |
| type vi secretion system-associated fha domain protein tagh | FIU04_08560 | Not Available | Positive | 1654672 - 1655952 | 47372.8 |
| type vi secretion system lipoprotein tssj | FIU04_08565 | Not Available | Positive | 1655949 - 1656473 | 19407.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






