Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | strain FDAARGOS_776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3953 genes
Non-Coding Genes
597 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna ligase rtcb family protein | FIU04_08385 | Not Available | Negative | 1619441 - 1620034 | 21686.8 |
| gnat family n-acetyltransferase | FIU04_08390 | Not Available | Negative | 1620253 - 1620705 | 17512.9 |
| dna polymerase iv | FIU04_08395 | Not Available | Negative | 1620702 - 1621757 | 39518.2 |
| putative lateral flagellar export/assembly protein lafu | FIU04_08400 | Not Available | Negative | 1621828 - 1622598 | 28386.2 |
| flagellar type iii secretion system protein flha | FIU04_08405 | Not Available | Positive | 1622558 - 1624297 | 63268.2 |
| rep-associated tyrosine transposase rayt | FIU04_08410 | Not Available | Negative | 1624420 - 1624917 | 20038.9 |
| nlpc/p60 family protein | FIU04_08425 | Not Available | Negative | 1626166 - 1626939 | 29806.7 |
| type ii toxin-antitoxin system antitoxin dinj | FIU04_08430 | Not Available | Positive | 1627125 - 1627385 | 9392.3 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | FIU04_08435 | Not Available | Positive | 1627388 - 1627666 | 10801.2 |
| murein l,d-transpeptidase | FIU04_08440 | Not Available | Positive | 1627822 - 1628562 | 28022.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






