Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | strain FDAARGOS_776 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Pteropodidae |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3953 genes
Non-Coding Genes
597 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | FIU04_06725 | Not Available | Positive | 1276733 - 1279315 | 97287.1 |
| lps assembly lipoprotein lpte | FIU04_06730 | Not Available | Positive | 1279330 - 1279911 | 21357.8 |
| dna polymerase iii subunit delta | FIU04_06735 | Not Available | Positive | 1279911 - 1280942 | 38705.0 |
| nicotinate-nucleotide adenylyltransferase | FIU04_06740 | Not Available | Positive | 1280944 - 1281585 | 24529.3 |
| ribosome silencing factor | FIU04_06750 | Not Available | Positive | 1282480 - 1282797 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | FIU04_06755 | Not Available | Positive | 1282801 - 1283268 | 17342.1 |
| peptidoglycan dd-transpeptidase mrda | FIU04_06760 | Not Available | Positive | 1283299 - 1285200 | 70816.6 |
| peptidoglycan glycosyltransferase mrdb | FIU04_06765 | Not Available | Positive | 1285203 - 1286315 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | FIU04_06770 | Not Available | Positive | 1286326 - 1287414 | 37502.0 |
| d-alanyl-d-alanine carboxypeptidase daca | FIU04_06775 | Not Available | Positive | 1287553 - 1288764 | 44446.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5177732 |
| Diarrheal disease | Causes | PMC5177732 |
| Shigellosis | Causes | PMC6038740 |
| Shigellosis | Causes | PMC2271788 |
| Shigellosis | Causes | PMC5447701 |
| Bacterial dysentery | Causes | PMC5447701 |
| Diarrhea | Causes | PMC8886675 |
| Dysentery | Causes | PMC8886675 |
| Shigellosis | Causes | PMC8886675 |






