Escherichia coli strain KCJK8463

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain KCJK8463 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility due to the presence of flagella. This strain is classified as mesophilic, with an optimal growth temperature of 37°C. It is characterized by its ability to exist in pairs or singles and has a unique biotic relationship as a free-living organism. KCJK8463 is associated with a diverse range of hosts, including Homo sapiens, various livestock species such as Bos taurus and Sus scrofa, as well as avian species and even invertebrates like Apis mellifera and Acanthamoeba. This wide host range reflects its adaptability and ecological versatility. The strain is notable for its pathogenic potential, being linked to a variety of health effects in humans, including urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. It is implicated in severe conditions such as hemolytic uremic syndrome (HUS), peritonitis, and foodborne infections, highlighting its relevance in clinical microbiology. In summary, E. coli strain KCJK8463 exemplifies the complexity of microbial interactions within host environments, serving as both a commensal and a pathogen. Its capacity to thrive in multiple hosts and cause significant health issues underscores the importance of monitoring this strain in both clinical and environmental contexts. Understanding its pathogenic mechanisms could provide insights into prevention and treatment strategies for associated diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain KCJK8463

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK8463
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain KCJK8463

Gene Summary

Adenine Count

1154748 bp

Thymine Count

1159507 bp

Guanine Count

1199393 bp

Cytosine Count

1202432 bp

Genome Length

4716080 bp

Protein-coding Genes

4411 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome bd-i oxidase subunit cydxFIB70_00550Not AvailableNegative109550 - 1096634041.9
cytochrome d ubiquinol oxidase subunit iiFIB70_00555Not AvailableNegative109678 - 11081742455.6
cytochrome ubiquinol oxidase subunit iFIB70_00560Not AvailableNegative110833 - 11240158208.4
mannosylglycerate hydrolaseFIB70_00565Not AvailableNegative113248 - 115881100021.0
gntr family transcriptional regulatorFIB70_00575Not AvailablePositive117984 - 11870628274.9
succinate--coa ligase subunit alphaFIB70_00580Not AvailableNegative118810 - 11967929779.3
adp-forming succinate--coa ligase subunit betaFIB70_00585Not AvailableNegative119679 - 12084541395.1
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseFIB70_00590Not AvailableNegative121068 - 12228544014.0
2-oxoglutarate dehydrogenase e1 componentFIB70_00595Not AvailableNegative122300 - 125101105080.0
succinate dehydrogenase iron-sulfur subunitFIB70_00600Not AvailableNegative125302 - 12601826785.4

Displaying genes 121 – 130 of 4502 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total