Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8577 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1110643 bp
Thymine Count
1116898 bp
Guanine Count
1179575 bp
Cytosine Count
1174467 bp
Genome Length
4581588 bp
Protein-coding Genes
4427 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system antitoxin yafn | FIB98_14145 | Not Available | Positive | 2913744 - 2914037 | 11234.4 |
| type ii toxin-antitoxin system yafo family toxin | FIB98_14150 | Not Available | Positive | 2914040 - 2914438 | 15473.7 |
| trap transporter large permease | FIB98_14155 | Not Available | Negative | 2914446 - 2915667 | 43110.8 |
| trap transporter small permease | FIB98_14160 | Not Available | Negative | 2915710 - 2916186 | 17470.3 |
| fad-binding protein | FIB98_14165 | Not Available | Negative | 2916207 - 2918288 | 76095.4 |
| acyl coa:acetate/3-ketoacid coa transferase | FIB98_14170 | Not Available | Negative | 2918285 - 2919826 | 55618.8 |
| enoyl-coa hydratase/isomerase family protein | FIB98_14175 | Not Available | Negative | 2919836 - 2920612 | 28576.5 |
| sugar phosphate isomerase/epimerase | FIB98_14180 | Not Available | Negative | 2920622 - 2921464 | 30997.0 |
| 3-ketoacyl-acp reductase | FIB98_14185 | Not Available | Negative | 2921474 - 2922265 | 28465.5 |
| tetr/acrr family transcriptional regulator | FIB98_14190 | Not Available | Positive | 2922478 - 2922575 | 3755.47 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





