Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8577 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1110643 bp
Thymine Count
1116898 bp
Guanine Count
1179575 bp
Cytosine Count
1174467 bp
Genome Length
4581588 bp
Protein-coding Genes
4427 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde 2,1-aminomutase | FIB98_13430 | Not Available | Negative | 2753344 - 2754624 | 45342.7 |
| h(+)/cl(-) exchange transporter clca | FIB98_13435 | Not Available | Positive | 2754849 - 2755999 | 41193.6 |
| hypothetical protein | FIB98_13440 | Not Available | Positive | 2756137 - 2756481 | 12525.9 |
| microcin c abc transporter atp-binding protein yejf | FIB98_13445 | Not Available | Negative | 2756485 - 2758074 | 58729.8 |
| abc transporter permease | FIB98_13450 | Not Available | Negative | 2758076 - 2759101 | 38094.6 |
| microcin c abc transporter permease yejb | FIB98_13455 | Not Available | Negative | 2759101 - 2760195 | 40362.6 |
| abc transporter substrate-binding protein | FIB98_13460 | Not Available | Negative | 2760196 - 2762010 | 69672.6 |
| cyclic di-gmp phosphodiesterase | FIB98_13465 | Not Available | Negative | 2762092 - 2763648 | 58591.5 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | FIB98_13470 | Not Available | Negative | 2763829 - 2764395 | 21041.1 |
| yqae/pmp3 family membrane protein | FIB98_13475 | Not Available | Positive | 2764518 - 2764676 | 5865.57 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





