Escherichia coli strain KCJK8592

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain KCJK8592 is a Gram-negative, rod-shaped bacterium characterized by its ability to arrange in pairs and singles. This strain is classified as a facultative anaerobe, allowing it to thrive in varying oxygen conditions. It is motile, possessing flagella, and has an optimal growth temperature of 37°C, fitting within the mesophilic temperature range. KCJK8592 is a free-living organism associated with various hosts, including Homo sapiens, Gallus gallus, Bos taurus, and many others across diverse taxa such as mammals, birds, and even plants like Solanum lycopersicum. This strain is notable for its significant health impacts, being associated with a range of infections in humans and other hosts. It has been linked to urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and more severe conditions such as septicemia and hemolytic uremic syndrome (HUS). The wide array of health effects underscores its pathogenic potential, particularly in humans where it is a common cause of foodborne illnesses and severe gastrointestinal diseases. The ecological insight from the data indicates that E. coli strain KCJK8592 has a versatile ecological niche, being able to colonize both animal hosts and various environments. Its association with multiple host species suggests a complex interplay in microbial ecosystems, highlighting the importance of understanding such pathogens in the context of public health and environmental microbiology. The strain's capacity for pathogenicity in humans emphasizes the need for ongoing surveillance and research to mitigate its health impacts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain KCJK8592

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK8592
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain KCJK8592

Gene Summary

Adenine Count

1122943 bp

Thymine Count

1120093 bp

Guanine Count

1172809 bp

Cytosine Count

1165724 bp

Genome Length

4581572 bp

Protein-coding Genes

4378 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chloramphenicol/florfenicol efflux mfs transporter florFIC02_20495Not AvailableNegative4130617 - 413183142715.4
duf3363 domain-containing proteinFIC02_20500Not AvailableNegative4132048 - 413293233024.4
is91 family transposaseFIC02_20505Not AvailableNegative4132963 - 413433050753.6
selenocysteine-specific translation elongation factorFIC02_20510Not AvailableNegative4134395 - 413615265416.4
l-seryl-trna(sec) selenium transferaseFIC02_20515Not AvailableNegative4136149 - 413754050610.2
glutathione s-transferaseFIC02_20520Not AvailableNegative4137638 - 413824622546.3
porin ompcFIC02_20525Not AvailablePositive4138683 - 413978940425.4
fad:protein fmn transferase apbeFIC02_20530Not AvailablePositive4139901 - 414095638551.0
bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase adaFIC02_20535Not AvailablePositive4141030 - 414209439326.0
dna oxidative demethylase alkbFIC02_20540Not AvailablePositive4142094 - 414274424065.8

Displaying genes 3991 – 4000 of 4544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total