Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative portal protein | FIC06_01200 | Not Available | Negative | 262977 - 263421 | 16998.5 |
| Tail completion protein | FIC06_01205 | Not Available | Positive | 263418 - 263840 | 15922.4 |
| Baseplate protein | FIC06_01210 | Not Available | Positive | 263907 - 264542 | 22189.3 |
| Baseplate wedge subunit | FIC06_01215 | Not Available | Positive | 264539 - 264886 | 12638.3 |
| Baseplate assembly | FIC06_01220 | Not Available | Positive | 264891 - 265799 | 32754.7 |
| Tail fibers protein | FIC06_01225 | Not Available | Positive | 265792 - 266403 | 22520.9 |
| Tail fiber protein | FIC06_01230 | Not Available | Positive | 266400 - 267683 | 45909.6 |
| Tail fiber assembly protein | FIC06_01235 | Not Available | Positive | 267683 - 268276 | 21471.8 |
| Tail fiber assembly protein | FIC06_01240 | Not Available | Negative | 268248 - 268688 | 16707.6 |
| Tail protein | FIC06_01245 | Not Available | Negative | 268930 - 269103 | 6389.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Renal failure | Causes | PMC3505186 |
| Meningitis | Causes | PMC3505186 |
| Urinary tract infections | Causes | PMC3789825 |
| Bloodstream infections | Causes | PMC3789825 |
| Acute pyelonephritis | Causes | PMC3789825 |
| Osteomyelitis | Causes | PMC3789825 |
| Septic arthritis | Causes | PMC3789825 |
| Septic shock | Causes | PMC3789825 |
| Invasive disease | Causes | PMC3789825 |
| Uti | Causes | PMC3789825 |





