Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | FIC06_16725 | Not Available | Negative | 3407725 - 3407931 | 7560.69 |
| Hypothetical protein | FIC06_16730 | Not Available | Negative | 3408087 - 3408548 | 16750.2 |
| Attr | Not Available | Not Available | Positive | 3408573 - 3408584 | Not Available |
| Putative transcriptional regulator (repressor) | FIC06_16735 | Not Available | Negative | 3408694 - 3409383 | 25643.4 |
| Putative cro | FIC06_16740 | Not Available | Positive | 3409517 - 3409789 | 9990.9 |
| hypothetical protein | FIC06_16745 | Not Available | Negative | 3409911 - 3410138 | 8336.12 |
| hypothetical protein | FIC06_16750 | Not Available | Positive | 3410227 - 3410547 | 12005.7 |
| hypothetical protein | FIC06_16755 | Not Available | Positive | 3410623 - 3410934 | 11529.6 |
| Hypothetical protein | FIC06_16760 | Not Available | Positive | 3410934 - 3411641 | 26899.6 |
| Putative antirepressor | FIC06_16765 | Not Available | Positive | 3411661 - 3411837 | 7226.58 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





