Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traf | FIC06_03970 | Not Available | Positive | 824286 - 825326 | 39025.4 |
| conjugal transfer protein trah | FIC06_03975 | Not Available | Positive | 825328 - 826761 | 51262.9 |
| conjugal transfer protein trag | FIC06_03980 | Not Available | Positive | 826774 - 830388 | 127853.0 |
| permease | FIC06_03985 | Not Available | Negative | 830426 - 830788 | 13361.5 |
| nucleotide excision repair protein | FIC06_03990 | Not Available | Positive | 831504 - 831776 | 10517.7 |
| lytic transglycosylase domain-containing protein | FIC06_03995 | Not Available | Positive | 831776 - 832309 | 19354.0 |
| transcriptional regulator | FIC06_04000 | Not Available | Positive | 832320 - 832928 | 22812.0 |
| regulator | FIC06_04005 | Not Available | Positive | 832925 - 833476 | 20624.0 |
| dna-binding protein | FIC06_04010 | Not Available | Negative | 833536 - 833955 | 16202.3 |
| hypothetical protein | FIC06_04015 | Not Available | Negative | 833957 - 834250 | 10795.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





