Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 3 | FIC06_02890 | Not Available | Positive | 615920 - 617746 | 64143.2 |
| formate hydrogenlyase subunit hycd | FIC06_02895 | Not Available | Positive | 617749 - 618672 | 33031.4 |
| hydrogenase large subunit | FIC06_02900 | Not Available | Positive | 618690 - 620399 | 64931.0 |
| formate hydrogenlyase subunit hycf | FIC06_02905 | Not Available | Positive | 620409 - 620951 | 20330.4 |
| formate hydrogenlyase subunit hycg | FIC06_02910 | Not Available | Positive | 620951 - 621718 | 27999.7 |
| formate hydrogenlyase maturation protein hych | FIC06_02915 | Not Available | Positive | 621715 - 622125 | 15465.5 |
| hydrogenase maturation peptidase hyci | FIC06_02920 | Not Available | Positive | 622118 - 622588 | 17027.6 |
| hypothetical protein | FIC06_02925 | Not Available | Positive | 622631 - 623386 | 28375.1 |
| helix-turn-helix domain-containing protein | FIC06_02930 | Not Available | Positive | 623457 - 623876 | 15417.2 |
| 6-phospho-beta-glucosidase | FIC06_02935 | Not Available | Negative | 623990 - 625414 | 53801.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





