Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | FIC06_02740 | Not Available | Positive | 589782 - 590492 | 25738.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | FIC06_02745 | Not Available | Positive | 590492 - 590971 | 16898.6 |
| trna pseudouridine(13) synthase trud | FIC06_02750 | Not Available | Positive | 590968 - 592017 | 39222.8 |
| 5'/3'-nucleotidase sure | FIC06_02755 | Not Available | Positive | 591998 - 592759 | 26902.0 |
| protein-l-isoaspartate o-methyltransferase | FIC06_02760 | Not Available | Positive | 592753 - 593379 | 23259.2 |
| murein hydrolase activator nlpd | FIC06_02765 | Not Available | Positive | 593519 - 594658 | 40121.2 |
| rna polymerase sigma factor rpos | FIC06_02770 | Not Available | Positive | 594721 - 595713 | 37975.1 |
| marr family transcriptional regulator | FIC06_02775 | Not Available | Negative | 595834 - 596241 | 15493.9 |
| ubix family flavin prenyltransferase | FIC06_02780 | Not Available | Positive | 596389 - 596982 | 21457.3 |
| ubid family decarboxylase | FIC06_02785 | Not Available | Positive | 596982 - 598409 | 52399.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





