Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynfc family lipoprotein | FIC06_02640 | Not Available | Positive | 570894 - 571604 | 26508.3 |
| spermidine n1-acetyltransferase | FIC06_02645 | Not Available | Negative | 571607 - 572167 | 21888.2 |
| duf1283 family protein | FIC06_02650 | Not Available | Negative | 572202 - 572543 | 12909.3 |
| ynfa family protein | FIC06_02655 | Not Available | Positive | 572678 - 573004 | 11920.2 |
| starvation-sensing protein rspa | FIC06_02660 | Not Available | Positive | 573210 - 574424 | 45971.0 |
| zn-dependent oxidoreductase | FIC06_02665 | Not Available | Positive | 574436 - 575455 | 36478.1 |
| crispr-associated helicase/endonuclease cas3 | FIC06_02670 | Not Available | Positive | 575505 - 578204 | 101946.0 |
| type i-e crispr-associated protein cse1/casa | FIC06_02675 | Not Available | Positive | 578302 - 579864 | 59712.5 |
| type i-e crispr-associated protein cse2/casb | FIC06_02680 | Not Available | Positive | 579861 - 580394 | 20664.7 |
| type i-e crispr-associated protein cas7/cse4/casc | FIC06_02685 | Not Available | Positive | 580409 - 581482 | 39194.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





