Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8610 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316875 bp
Thymine Count
1319196 bp
Guanine Count
1364458 bp
Cytosine Count
1357555 bp
Genome Length
5358214 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
229 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FIC06_02080 | Not Available | Negative | 455579 - 455764 | 7228.52 |
| protein ypfm | FIC06_02085 | Not Available | Negative | 455764 - 455823 | 2408.02 |
| taurine abc transporter substrate-binding protein | FIC06_02090 | Not Available | Positive | 456147 - 457109 | 34239.8 |
| taurine abc transporter atp-binding subunit | FIC06_02095 | Not Available | Positive | 457122 - 457889 | 28298.5 |
| taurine abc transporter permease tauc | FIC06_02100 | Not Available | Positive | 457886 - 458713 | 29585.6 |
| taurine dioxygenase | FIC06_02105 | Not Available | Positive | 458710 - 459561 | 32411.3 |
| porphobilinogen synthase | FIC06_02110 | Not Available | Negative | 459667 - 460641 | 35626.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | FIC06_02115 | Not Available | Positive | 461165 - 464143 | 106476.0 |
| hydrogen peroxide resistance inhibitor ipra | FIC06_02120 | Not Available | Positive | 464231 - 464854 | 23930.0 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | FIC06_02125 | Not Available | Negative | 464855 - 466012 | 41851.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





